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Office of Science User Facilities
Annual Retreat 2003

retreat agenda (.doc)

retreat attendee list (.xls)

Posters

.ppt

.pdf

Alyssa Redding Oxygen stress in Desulfovibrio vulgaris Hildenborough:  Proteomics using ICAT and Tandem LCMS
Aindrila Mukhopadhyay Sensing the Environment: Deciphering the roles of two-component systems in Desulfovibrio vulgaris Hildenborough
Brett Emo  Deletion mutagenesis of Desulfovibrio vulgaris using advanced PCR methods
Denise Wyborski and Carl Abulencia Accessing Stress Response Pathways From the Genomes of Microorganisms Living in Contaminated Soils
Dominique Joyner Chemically defined medium for Desulfovibrio vulgaris stress studies and biomass production
Dorothea Thompson Molecular Basis of Heavy Metal Resistance in Shewanella oneidensis MR-1
Edward Baidoo Protocols for Metabolome Analysis in Desulfovibrio vulgaris via Electrospray Mass Spectrometry
Grant Zane  Electroporation and Protein Tagging Protocols for Desulfovibrio vulgaris 
Haichun Gao Gene expression profile of Shewanella oneidensis in response to cold stress
Hoi-Ying Holman A real-time investigation of Desulfovibrio vulgaris response to oxygen stress
Huei-Che Bill Yen Cell Yields of Desulfovibrio vulgaris on various growth media
Janet Jacobsen On-Line Hazen Lab Data Center: Access, Display, and Analysis Tools
Jil Geller Chemostat growth of Desulfovibrio vulgaris using the FairManTec bioreactors
Joseph Ringbauer Random Transposon Mutagenesis of Desulfovibrio vulgaris Hildenborough
Jun Sun Proteome Analysis of Desulfovibrio vulgaris upon Oxidative Stress Using 3D LC-MS/MS
Katherine Huang The VIMSS Comparative Genomics Database And Website
Kelly Bender Cloning of small RNAs and mutagenesis of the highly upregulated gene for phage shock protein A of Desulfovibrio vulgaris 
Masood Hadi Protein Complex Identification in Desulfovibrio vulgaris 
Mathew Fields Transcriptional Analysis and Characterization of Desulfovibrio vulgaris Cells  from Logarithmic and Stationary Phase Growth
Mathew Fields Polyphasic Characterization of Microbial Communities Under the Stressful Conditions of Nitrate, Heavy Metals, Radionuclides, and Acidic pH in Contaminated Groundwater
Morgan Price Evidence for the Co-regulation Theory of Operons
Morgan Price Prediction and Validation of Operons Across the Prokaryotes 
Qiang He Global transcriptional analysis of Desulfovibrio vulgaris in response to nitrite stress 
Qiang He Transcriptional analysis of Desulfovibrio vulgaris responses to NaCl stress using oligonucleotide microarray 
Richard Koche Using Comparative Genomics to Improve Clustering of Gene Expression Data
Sergey Stolyar Syntrophic associations of Desulfovibrio spp. and a hydrogenotrophic methanogen for studying microbial stress response
Sergey Stolyar Isolation and characterization of sulfate reducing bacteria from the NABIR Field Research Center, TN and a heavy metal impacted lake
Sharon Borglin Effects of environmental stressors on signature lipid biomarkers in Desulfovibrio vulgaris 
Swapnil Chhabra Identification of Proteins Involved in Stress Response in Desulfovibrio vulgaris using  Differential In-Gel Electrophoresis/Mass Spectrometry (DIGE-MS)
       

Presentations

.ppt

.pdf

Adam Arkin Making a Stress Book (to Reduce Stress)
Aindrila Mukhopadhay Overview of ICAT Proteomics: Oxygen stress in Desulfovibrio vulgaris
David Stahl Analysis Updates: Desulfovibrio/Methanogen Syntrophic Co-cultures, Sulfate-limited Chemostat Growth of Desulfovibrio spp., Sulfate-reducing Field Isolates
Eric Alm Insights from Comparative Analysis of Four Sulfate Reducing Bacteria
Judy Wall Functional Genomics: Progress with Physiology and Genetic Tools
Mathew Fields Molecular Characterization of Microbial Community Structure in Contaminated Groundwater
Mathew Fields Polyphasic characterization of microbial communities under the stressful conditions of nitrate, heavy metals, radionuclides, and acidic pH in contaminated groundwater
Mathew Fields Transcriptional Analysis and Characterization of Desulfovibrio vulgaris Cells from Logarithmic and Stationary Phase Growth
Terry Hazen Applied Environmental Microbiology Core
Wen Yu Proteomics of D. vulgaris and its response to oxidative stress