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Presentations
 
Deduction of Stress Response Pathways in Metal and Radionuclide
Reducing Bacteria
- Adam Arkin
19.48 MB MS Powerpoint
Stress Response in Desulfovibrio vuglaris Hildeborough: A Proteomics Approach - Alyssa Redding 10.1 MB pdf

Alternative H2 Cycling Model Tutorial - Judy Wall
Judy Wall's tutorial on an alternative to the classical H2 cycling model
Classical H2 Cycling Model: During oxidation of organic acids, hydrogen cycling has been proposed to occur whereby the reducing equivalents and protons produced (2H+ + 2e-) are substrates for cytoplasmic membrane bound hydrogenases which generate hydrogen that then diffuses into the periplasm. Periplasmic hydrogenases oxidize the hydrogen and the electrons are recaptured by the c-type cytochromes and ultimately return to the cytoplasm for use in sulfate reduction. The protons left contribute to the proton gradient which drives ATP synthesis, membrane, then use for sulfate reduction.

Alternative H2 Cycling Model: Lactate is oxidized by the membrane-bound lactate dehydrogenase (LDH) passing electrons to the putative pool of menaquinone (MK). MK picks up cytoplasmic protons upon reduction and delivers them to the periplasm while delivering electrons to a carrier such as the quinone-interacting membrane bound oxidoreductase (QMO) Pyruvate oxidation may result in delivery of electrons to a transmembrane complex that pumps protons to the periplasmic face of the cytoplasmic membrane. There tetraheme cytochrome c3 accepts the electrons and simultaneously becomes protonated. If cytc3 cannot be oxidized by HMC rapidly enough, H2 will be generated and subsequently cycled by the NiFe Hase. Cytochrome c3 is proposed to deliver e- to HMC (or another transmembrane conduit) and H+ to the ATPase. Thus no free proton gradient need be established.

76 KB MS PowerPoint

Functional Genomics: Rise of the Metabolomics - Lianhong Sun 2 MB, MS PowerPoint